Sentence examples for trimming based on from inspiring English sources

Another 67 positions were excluded by applying the 'strict' option (trimming based on an automatically selected sequence similarity threshold [ 59]).

Elimination of poor-quality end reads from pyrosequencing raw data was done by quality trimming based on quality scores.

In these scenarios, appropriate trimming based on quality seems to be more important, whereas technical sequence identification appeared to matter less.

Iteration starts with subjecting the "units" to automatic plausibility checks and statistical trimming based on current values of cost per inlier equivalent.

Overall, 88,449 ATIV and 82,539 TIV were administered for a total of 170,988 person-seasons; after the data trimming based on the person-season distribution, we included a total of 164,254 person-seasons in the primary analysis.

Quality trimming of the Illumina data was performed with the windowed adaptive trimming tool Sickle (https://github.com/najoshi/sickle), using q = 30 as the threshold for trimming based on average quality in the sliding window and l = 50 as the threshold to keep a read based on length after trimming.

The paired-end sequences were trimmed based on quality score by bTrim (Kong, unpublished, http://graphics.med.yale.edu/trim/readme).edu/trim/readme

Prior to de novo assembly, all obtained 40-mer reads were trimmed based on the phred quality value obtained using the Euler-SR qualitytrimmer command [26].

The candidate miRNA list was further trimmed based on the criteria as described [ 17, 42].

Reads were trimmed based on Phred quality scores at the probability threshold of p = 0.05.

The Illumina reads were first trimmed based on their quality scores using Btrim [ 45].