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Second, PubTator currently only works for the bioconcept annotation and document triage tasks.
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Many teams contributed web-based NER tools using the BioC format for the CTD triage task.
The CTD triage task is being further developed as one of the tasks for the BioCreative IV Challenge.
For the Triage task, the numbers of positive and negative examples are only 1031 and 694, respectively.
> -wrap-foot> The proposed method in the Triage task includes new feature types: semantic and topic features.
The mycoSORT system (17) is a tool created to support the triage task of the mycoCLAP manual curation process.
We received second place in the triage task of BioCreative 2012, and the best MAP score was 0.803 (36).
As in BioCreative III, we also found that accurate NER is a critical component for this Triage task.
As a requirement for the Triage task, chemical, gene and disease actors should be annotated for result submission.
For the BioCreative 2012 Triage task, possible feature candidates, including both co-occurrence and network features, were examined and explored.
Relations involving chemicals have substantially lower coverage rates which seems a bit unfortunate for the CTD triage task.
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