Sentence examples for tree command from inspiring English sources

Bootstrap values were calculated and visualized using the majority rule consensus tree command in PAUP 4.0d701 [ 85] (Additional file 6).

Because traffic indicators are highly correlated, however, we considered cluster analysis as a secondary selection method; the tree command in R groups observed concentrations by applying an impurity criterion to minimize within-group variances while maximizing between-group differences.

All traffic and land use variables were created in ArcGIS 9, clustering analyses were performed using the tree command in R version 2.2.0, and model-building in SAS version 9.1.

In the 1940s, when E. B. White, the author and essayist for The New Yorker, looked out of his back windows onto the private Turtle Bay Gardens along East 48th Street in Manhattan, an old but picturesque willow tree commanded his view.

All parameters were optimized and 1002 bootstrap replicates were obtained from the tree (commands: mpirun -n 6 phyml-mpi -i 175toPhyML.phylip -b 1002 -d aa -m LG -f m -s SPR --rand_start --n_rand_starts 5 -v e -a e -o tlr).

For each position, the variability category, i.e. the total number of evolutionary changes, was determined by loading sequence data and a ML treefile with PAUP 4.0b10 [ 126], selecting the Parsimony optimality criterion, and using the 'Describe trees' command with the 'list of changes' option.

The limestone outcrop behind their weekend home, a later purchase, is the southern edge of the Vertes hill country, and its elevated position among narrow plots planted with grapevines, lavender and fruit trees commands fine views across a wide plain towards Lake Balaton, the largest lake in central Europe.

In this analysis, we used "are NOT" option of tree constraint command implemented in PAUP4.0 b [ 28].

Using the tree.shared command in Mothur, a distance matrix was calculated using the Bray Curtis dissimilarity and the shared OTU file described above.

The remaining ones were used to compute the majority rule consensus tree (MrBayes command allcompat), the posterior probability of clades and branch lengths.

Other queries (such as the tree mining command) go through the query processor, which first identifies candidate trees using the inverted index and then performs further computations to get the final results (see Figure 8).