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Several GO terms that map to LTRs (e.g., retrotransposon nucleocapsid, transposition) were also significantly co-localized under both analyses but are not included in Table 2 because of the redundancy in the mapping.> -wrap-foot> MPED: the median of pairwise Euclidean distances in the 3D reconstruction.
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The ISEcp1-blaCTX-M-15 element seems to show high affinity for this target sequence because its transposition was also described for another IncFII plasmid, pC15a-1a [14].
Further, TE transposition is also an important factor for nucleotide-base mutation rate, and thus, TEs serve as potential agents of evolutionary changes.
The lineages may not be completely inactivated, as recent transpositions were also detected, compatible with the presence of potentially active copies in D. biarmipes and D. bipectinata.
Because the result (product) of two transpositions is also a transposition, the effect of multiple transpositions is to define a complex route in the matrix, which in itself would be difficult to describe by any simple mnemonic.
Single-ORF transpositions are also evident in some cases (e.g., Ecu03_240 in Figure 2 and Ecu07_0270 in Figure 4).
Variants of the permutation sorting problem which allow both reversals and transpositions are also regarded in the literature [ 14- 16].
Loss of buoyancy due to rearranged gas vesicle gene clusters by IS transpositions was also previously described in Microcystis strains kept in laboratory culture [ 56].
Transposition reactions were also conducted at pH 9.0 where YRY triplex formation is less favored [30], [31].
The same transposition assay was also used on the co-- occuring set of baco-- occuringins in order to identify a possible assoco-- occuringtheir gene productsetnd TnsE--?mediated transpofition.
Special transposition operators are also employed in GEP to randomly select a fragment of the chromosome and insert it into the head.
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