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Regulatory network topology determines the nature of possible regulatory states, as well as the possible transitions paths between them.
Computation Tree Logic (CTL) formulas describe the properties of computation trees, whose root corresponds to the initial state S 0. The branches and leaves represent all possible sequences of state transitions (paths) from the root [ 21].
The root of the computation tree corresponds to an initial state and the other nodes on the tree correspond to all possible sequences of state transitions (paths) from the root [ 10].
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ACSU computes the accumulated metric associated with the sequence of transitions (path) to reach a state.
These include concepts such as: technology transitions, path dependence, lock-in, and 'emerging irreversibilities'.
The number of transition paths increases to 64 parallel paths.
We used a multistate model which uses transition paths to simultaneously assess multiple end points.
Outcomes of the 3 individual transition paths were analyzed by a multistate model.
The links also represent cohorts based on specific transition paths across the phases.
Dynamical equations for the optimal transition paths are derived using the variational principle.
Grain form frequencies increase with increasing number of transition paths into them from other forms.
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