Sentence examples for transgenic set from inspiring English sources

Correspondingly, 103 of the 355 genes up regulated in tumor were appended to the transgenic set to derive an extended set of up regulated genes in transgenic cells (set 4).

Another observation in T1 35S:HvCesA4 was that, regardless of the phenotypes observed, tight co-regulation between the three endogenous genes was maintained across the whole transgenic set (correlation coefficients, r, of 0.85 to 0.99), indicating that the dwarf phenotype did not perturb the coordination of gene transcription of the three SCW HvCesA genes.

Unlike PCW transgenic sets, a higher up-regulation of SCW CesA transgene levels was observed and measured to be more than 10% of the endogenous levels in control plants.

Are all five of the transgenic sets on the same genetic background?

There are several points that the authors should consider addressing in their revision: Are all five of the transgenic sets on the same genetic background?

Oncogenic functions of miR-155 have been reported previously (reviewed in Lujambio and Lowe, 2012); in fact, miR-155 was the first example of an miRNA that in a transgenic setting was able to initiate cancer (Costinean et al, 2006; O'Connell et al, 2008).

Thus, for 77 of the 303 up regulated genes in transgenic cells (set 2), a probe set detected by statistical analysis also had a fold change >2 in tumor cells, and these 77 genes were added to the 355 genes up regulated in tumor to obtain an extended set of up regulated genes in tumor cells.

In Figure 6, q-values of TRANSFAC motifs optimized for transgenic foreground sets are plotted against q-values of corresponding tumor foreground sets.

Importantly, this part of our study revealed overrepresentation of POU motifs predominantly in transgenic promoter sets.

Furthermore, motifs of HMG box factors were associated with transgenic gene sets in downregulation (Figure 6A, LEF1 PWMs) and specific upregulation (Figure 6D, Sry).

Instead, Foxc1 expression parallels the stronger enrichment of Forkhead binding sites in transgenic promoter sets, as it is specifically upregulated in the early progression state (Tables S1 and S5).