Sentence examples for transformed the expression from inspiring English sources

For the most highly expressed gene list, we have transformed the expression levels averaged over all samples to a 'standard score' (z-score), followed by a call to the 'fdrtool' R package to determine the corresponding q-values (Strimmer, 2008).

For each gene, we calculated the mean and standard deviation (stdev) of expression over all samples, and linearly transformed the expression value using the formula (RPKM-mean)/stdev.

We transformed the expression values into a Z-score for each miRNA or each gene.

To carry out the sample level enrichment analysis (SLEA) [ 23] of upregulated and downregulated targets of sample TF-partner circuits, I first transformed the expression of targets to mean-centered values.

We then hand-curated these two sets to remove inconsistencies and incorrect annotations, which resulted in 3648 genes with a KEGG id in total, and transformed the expression fold-change to a color gradient, where red represents up-regulation and green down-regulation.

An alternative of codon optimization is to transform the expression host with plasmids expressing rare tRNA.

Genes were grouped according to their expression profiles by transforming the expression data into moderate fold change estimates using a variance stabilizing transformation [ 37].

Indeed, if the secondary work sufficiently transforms the expression of the original work such that the two works cease to be substantially similar, then the secondary work is not a derivative work and, for that matter, does not infringe the copyright of the original work.

Squatting on Stonewall transforms the expression of our liberation from a single statement spoken in one voice into the vital and complicated conversation it actually is.

The lumi module in the R-based Bioconductor Package was used to transform the expression intensity into log2 scale [48].

Interestingly, once the effects of expression and protein function on the estimated evolutionary rate are taken into account the dependence of the latter on connectivity in a generalized linear regression model [ 16] (where we log-transformed the expression level to obtain an approximately normal distribution) is considerably reduced.