Sentence examples for transfers annotations from inspiring English sources

GATU transfers annotations from a reference genome to a closely related target genome, while still giving the user final control over which annotations should be included.

Additional attributes for further consideration include number of discrepant annotations per gene, further analysis of the types of computational predictions that proved helpful, and inclusion of other computational sources for predicting GO annotations such as the GO Consortium's PAINT project, a method that transfers annotations between organisms based on homology (28).

This is an inherent property of methods that transfer annotations, since better annotated species provide more source functions.

We have therefore designed and implemented a novel tool, Genome Annotation Transfer Utility (GATU), to transfer annotations from a previously annotated reference genome to a new target genome, thereby greatly reducing this laborious task.

For example, the subcellular localization data gives a spatial cellular landscape of whole genome proteins within a cell, while the orthologous information can help to annotate unknown genes by transferring annotations between orthologs.

The resulting sequence was annotated using the "find annotations" feature in Geneious, transferring annotations with a 50% or greater similarity from relatives with annotated sequences on GenBank: Amsinckia lycopsoides Lehm.

GOtcha calculates term-specific probability (P-score) measures of confidence instead of directly transferring annotations from highest scoring hits.

In the second step, a gene mapping program is used to transfer annotations from the reference to the target genome within the specific syntenic blocks.

These largest overlaps are key for transferring annotations between networks.

Functional annotation was performed by preferentially transferring annotations from the A. phagocytophilum HZ strain where appropriate.

Rentzsch and Orengo [ 38] transferred annotations in single profile-based sequence cluster.