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Moreover, we included all C. elegans rRNA transcripts as filter sequences, while the 5.8S (156-nt) and 5S (121-nt) rRNA transcripts were excluded in human.
Samples without detectable L1 viral gene transcripts were excluded from statistical analysis.
The extents of overlap between sRNA predicted entities, deep sequencing identified sequences and 5'RACE mapped start-sites are shown schematically in Figure 6; Northern-detected transcripts were excluded as their precise locations could not be conclusively inferred on the basis of available data.
Reads that had equal-quality matches to multiple transcripts were excluded.
1,825 probes matching reverse-complementary sequences of mRNA transcripts were excluded from the analysis.
Five transcripts were excluded due to a lack of the conserved WRKY domain in the predicted amino acid sequences.
Similar(37)
When the mutually overlapped transcripts are excluded, the expression profiles determined by the SS and NSS protocols are highly correlated (with a Pearson's correlation coefficient 0.9635, Figure 2(a)).
Probes with more than 20 contiguous identical bases to non-self transcript were excluded.
Background noise and poor-quality data were filtered out based on expression levels (fluorescence intensities); the probes showing expression values of <5 or >100 in more than 5 (3.3%) samples per transcript were excluded from the analysis.
Unique exons were defined as having at least one unique splice site; all exons that are first or last exons of a transcript were excluded them from the set if their splice junction was shared with another, longer exon, which was retained in the set.
Probe sets that were saturated by very abundant transcripts also were excluded from the analysis.
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