Sentence examples for transcripts set for from inspiring English sources

To verify the reliability of the NGS-based expression levels, 50 transcripts were chose randomly from the annotated transcripts set for primer design (Additional file 7: Table S6) and real-time quantitative RT-PCR analysis.

To validate the expression patterns obtained from the comparative RNA-Seq studies, 50 transcripts were selected randomly from the annotated transcripts set for qRT-PCR analysis (Additional file 4: Table S6).

For the transcript set for Cufflinks, we selected the longest predicted model as the representative transcript if there are more than two predicted models in the same locus.

For each miRNA, we scanned the 3′UTRs of the transcript set for all sites complementary to a miRNA subsequence beginning at either position one (α-position), two (β-position) or three (γ-position) relative to the miRNA 5′-end.

The result produced a high quality reference transcript set for this species for comparative analysis with D. melanogaster.

The functional prediction is made based on the translational consequence of a mutation against a reference transcript set, for example, Gencode.

Current annotation of loss of function variants is based on some reference transcript set, for example, GENCODE (Harrow et al., 2012), and selection of variants mapping within the units to include is chosen from the most deleterious annotation across all transcripts.

To provide a reference transcript set for white clover, cDNA from mixed above-ground material of a single pot-grown plant of the inbred line S1 was subjected to sequencing on the Roche GS_FLX platform using Titanium sequencing chemistry, generating a total of 768,512 cleaned reads (mean length 300.21 nt).

A hearing over the transcript is set for Thursday morning.

Again, careful choice of transcript set used for annotation can help.

The results of our comparison of annotations obtained using REFSEQ and ENSEMBL transcript sets emphasise the importance of the choice of transcript set used for annotation.