Of these, only NOTCH2 (exC5) and NOTCH3 (exC6) also had the 'regulation of transcription' term, consistent with the recognised role for NOTCH in keratinocyte development [40].
The initiating events in LTP expression are rapid and require neither de-novo protein synthesis nor transcription (termed Early LTP E-LTP), however LTP E-LTPenance requires bothoweverin transLTPion and maintenancerequires(Late LTP–L-LTP) [2], [3], [4], [5].
The transcription term is highly nonlinear and accounts for the system delay (T).
The DNA-protein complex observed in the EMSA includes a putative repressor of xyn2 transcription (termed "Xpp1", Xylanase promoter-binding protein 1).
We use textual transcription term instead of musical transcription due to storage format of the converted samples that is a plain text consists of binary value of the note numbers.
In this work, we analyze a gene model with auto regulation, where the promoter is assumed to have one active state with highly efficient transcription and one inactive state with very lowly efficient transcription (termed as promoter leakage).
Furthermore, we identified 111 genes containing hypermethylated promoters in PC that were enriched in 'regulation of transcription term'; among these genes, the methylation status of DLX4, ELAVL2, IRX1, PITX2, SIM2, TBX5, and TFAP2C was subsequently validated in the tissue samples by methylation-specific PCR (MSP).
To overcome the shortfall in the model simulations, we hypothesized that novel activation or transcription term(s) (positive feedback) may be present to provide additional flux for the continuous increase in group III expressions (Response rule 4, Additional file 1: Figure S1).
In fact, if the structures are involved in translational regulation, reduced degradation is just as effective as increased transcription in terms of raising steady-state transcript levels.
The vast majority of genes showed the same pattern of transcription in terms of increased or decreased transcript levels even though the fold-change values varied between the methods for individual transcripts (Additional file 5).
We quantified transcription in terms of GFP fluorescence per unit of cell density PFUS1-GFP/OD600 PFUS1-GFP/OD600
