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miRNA expression levels were estimated by TPM (transcript per million) using the following criteria [ 36].
dGroup-specific genes that are expressed more than one transcript per million reads (TPM).
This corresponds to the sum of transcript copies as 615,944 and 615,771 tpm (transcript per million).
eGroup-specific genes that are expressed more than one transcript per million reads (TPM) and have more than one GSR.
Here's a relevant portion of the Analyst Day transcript, per Seeking Alpha.
Y axis show transcript per million (TPM) showing abundance of the gene in the library.
Expression is measured using fragments per kilobase of transcript per million mapped reads (FPKM).
Transcript levels were quantified as fragments per kilobase of transcript per million mapped reads (FPKM).
For polyadenylated RNA, where it is possible to estimate abundance levels, 70%% of the documented coverage is below approximately one transcript per cell (100 103).
Similar(2)
GO, Gene Ontology; TPM, Transcripts Per Million; FPKM, Fragments Per Kilobase of transcript per Million mapped reads; RSCU, relative synonymous codon usage.
Per sample relative abundance was estimated using FPKM (fragments per kilobase of transcript per million fragments mapped), EC (expected counts) and TPM (transcripts per million).
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