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Although this was primarily a linkage study, we calculated evidence for association using the orthogonal test for quantitative traits implemented in QTDT [ 20] at 5,677 markers.
The qfam procedure (family-based association tests for quantitative traits) implemented in PLINK 1.05 was used to detect statistically significant associations after adjusting by sex and by performing 10000 permutations per SNP.
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A Gibbs sampling algorithm for all traits was implemented in R (R Development core Team 2009).
Associations between polymorphism sites and yield-related traits were implemented using general linear model analysis in the software package TASSEL 2.1 [ 61].
The mutational scheme with trait-lethals implemented in this model enhances the drive of trade-offs towards specialists, and we therefore hypothesize that specialization and niche breadth reduction are amplified by this mechanism in natural haploid asexual organisms.
"Mr. McCraw explains sophisticated economic theory in accessible terms," The New York Times Book Review said, "and he has a historian's knack for isolating such basic American traits as a mistrust of big business and for showing how regulators manipulated these traits to implement their policies".
Results of this study solidified the basis for studying important agricultural traits and implementing marker-assisted selection (MAS) toward genetic improvement in sesame.
Deriving accurate predictions of complex traits requires implementing whole-genome regression (WGR) models where phenotypes are regressed on thousands of markers concurrently.
Associations between aforementioned significant SNP markers and milk production traits were further implemented.
Therefore eight analyses with four traits each were implemented in the present study.
A pooling approach for RNA-profiling with the aim of identifying novel candidate genes associated with tuber quality traits was successfully implemented.
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