These two genes are (TIGR: LOC_Os04g23890) and (TIGR: LOC_Os11g03794) underlying QTLs-2 (drought susceptibility, trait symbol AQA045/CQ148) and QTL-5 (cold-tolerance, trait symbol CQP8) respectively.
A user can search QTLs by trait name, trait symbol, trait category, linkage group, published QTL symbol, Gramene QTL accession number or by associations such as QTL-associated genes and markers or PO terms.
In these columns, the number of QTLs and the number of meta-QTLs are indicated on the left and right sides of the "| ", respectively Trait symbols according to Table 2.
Trait symbols are derived from the trait name, e.g. plant height carries the symbol PTHT, and are used to display the QTL position on a linkage group.
The so-called 'trait' services, namely, the qtl-by-trait-accession, qtl-by-trait-symbol, qtl-by-trait-name, and qtl-by-trait-synonym allow searching for QTLs related to a specific trait.
Mr. Nuti, 38, a 10-year veteran of the networking giant Cisco, seemed to embody every trait that Symbol's executive recruitment committee could list.
The information includes traits (accession ID, symbol, synonyms, category) from the OBO-style trait ontology (TO) hosted at Gramene, as well as species (common and scientific name), linkage group, map name, and location on a map (start and end position).
The QTL data extracted from the literature included QTL names, symbols, traits, associated co-localized and neighboring markers, parental strains, types of crosses and other pertinent information.
Table 3 Important genes for prediction of biological traits of SJP-SNU Activity Symbol of gene Gene of SJP-SNU Accession nos.
Yellow blocks correspond to known data: no symbol is present for traits for which presence and absence have an equal probability (0.25 0.75).
Gramene currently offers 10 QTL resources allowing searching for QTLs by different means, such as by QTL metadata (accession ID, QTL symbol) as well as by trait (accession ID, symbol, synonyms, and category), species (common or scientific name), and linkage group (see Additional File 1).
