Sentence examples for traditional annotation from inspiring English sources
This confirms results in [53], where adaptive annotation automation in WebAnno can speed up the annotation process by a factor of 3 to 4 in comparison to a traditional annotation interface without suggestions.
493 distinct exact MS features were extracted, 30 of which were identified following a traditional annotation workflow using NIST MSPepsearch (see Additional file 2); in contrast, the EcoCyc MINE database proposed candidates for 132 of the accurate masses when searching with 5 mDa precision and with [M+]+, [M+H]+, [M+Na]+ adducts.
The procedure is usually viewed as classical named entity recognition (NER) followed by traditional annotation (19).
The known transcripts are likely the ones with the highest expression level as those are easiest to identify by traditional annotation strategies.
An automated video processing and behavior analysis system is desired to replace the traditional manual annotation.
A companion program, Taxonerator, that adds traditional taxonomic annotation to MOTU, is also presented.
Unlike traditional genomic annotation techniques, such as in silico (ab initio or comparative) or cDNA-seq-based methods, proteogenomics allows validating protein-coding genes directly at the protein level, which is more favorable (Renuse et al., 2011).
Traditional genome annotation pipelines are no longer able to scale to the rate of sequence production and new approaches are continually being considered (Nielsen et al. 2014; Pop 2009).
Traditional genome annotation databases and software such as the Gene Ontology and the KEGG pathway databases require a gene list as input and not position information, which makes them unsuitable for the dynamic positions and indels analysis that is required for the virtual genome data.
Unlike traditional binary function annotation in which if it is annotated, it is one; otherwise, it is zero, the KEGG enrichment gives a probability of this gene that has this function by considering its microenvironment on the protein-protein interaction network.
Several genes encoded by KSHV and EBV as well as other viruses do not conform to traditional strategies of annotation, requiring integration of multiple methods and frequently, extensive experimentation, for their detection.
