When secondary level of contact tracing is included, bistability might occur where the solution could approach either the endemic steady state or any of the DFEs (E0 or any one of the disease-free boundary steady states), as illustrated in rows 3 and 4 of Table 1 (and Fig. 4), depending on the initial proportions of population sizes.
In these analyses, realignment parameters, as well as eye movement traces, were included as covariates of no interest to remove eye movement and brain motion artifacts.
Only contigs that contained greater than 100 traces were included in the analysis.
The pattern is valid in an audit trail (A) with support (sigma =1) if every element of its workload trace is included in a workload trace (W_A) from position 1 to position 9. Let ((T^2VW emptyset W^2(TV emptyset W^2(T^2V)emptyset W) be a workload trace of an audit trail.
In practice, a similar analysis was performed where the CO2 trace was included as a regressor in a GLM.
But we note that had a different measure been used, that is, had the dynamics of the YFP time-trace been included, different estimates of I would be obtained (see also Supplementary file 2 for a further discussion).
For B. plicatilis publicly available data from dbEST and the trace archives were included into the clustering process, and public data for Philodina roseola was clustered the same way.
For phylostratum 12, given the low number of protein sequences for outgroups (Cyclostomata/Chondrichthyes), EST and Trace data were included in a tblastn query (translated nucleotide comparison), using an e-value threshold of <10-15 <10-15
Subsequently, using updated databases, molecular phylogenetics searched for the phylogeny of about 10 species [16], [23], [24], and mytilid relatives from whale carcasses and wood were included to trace the origins of Bathymodiolus mussels [25], [26].
With the exception of some H. lar individuals for which subspecies identity could not be traced, only clearly identified specimens were included in our study.
