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To eliminate sampling biases towards genera represented by many completely sequenced genomes, we performed statistical assessments at the level of genera rather than individual genomes.
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This enrichment step is laborious and may be biased towards particular genera or developmental stages of nematodes.
The genomic dissimilarity value [ δ* f, g)] of the genus Vibrio towards the genera Photobacterium and Aliivibrio was 38-66 and 35-59, respectively.
By contrast, resolution among genera decreased towards the base of the tree, and there were two examples of strongly supported incongruence (bootstrap proportion [BP] > 90).
Most culture collections were heavily biased towards photosynthetic, planktonic and toxic genera such as Alexandrium, Scrippsiella, Karlodinium, and Karenia.
Conservation was estimated by blast analysis towards organisms of the following genera: Citrobacter, Cronobacter, Escherichia, Edwardsiella, Enterobacter, Erwinia, Klebsiella, Pantoea, Salmonella, Serratia, Shigella, Sodalis, Vibrio and Yersinia.
In the first days of treatment, the majority of the total microbiota comprised species from the phylum Firmicutes, with the exception of FS-11 (11 days after AB treatment), which exhibited a remarkable shift towards Bacteroidetes (Parabacteroides and Bacteroides genera) and a significant increase in Betaproteobacteria (figure 1 and figure 1 in online supplement).
Although this suggests a higher relaxation towards genome enlargement in those two genera, the yet small differences in length between the studied gymnosperm genera suggests that EST-SSRs length contribution to Pinus and Picea genome obesity may be only modest.
Moreover, towards the end of pyrene mineralization (day 160), none of the genera in the soil-compost mixture belonged to the Betaproteobacteria class, but mainly to the Actinobacteria.
This indicates that the adaptation mechanisms towards cold may vary widely between psychrophilic strains within the same genera (Hu et al., 2008a).
In other genera of the Capitellidae, however, there is a clear tendency towards a fused ventral nerve cord.
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