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The annotation resulted in 3548 protein coding sequence encoded by 85.1% of the total sequence length.
Ultimately, the UCD10X produced the most contiguous assembly with over 75% of the total sequence length in contigs over 50 Kb (Fig. 4).
We constructed heatmaps that presented the community composition at the family level, including only families that contained >1% of the total sequence pool.
The subject's data also contained 1.5 million reads of novel sequence that did not map to build-36, corresponding to about 1.4% of the total sequence data.
Indeed, several metagenomes generated from less total sequence when compared to SJ3 yielded similarly high levels of protein diversity even when compared at the level of only 10,000 subsampled proteins (Fig. 5a; Supplementary Data 10).
The total sequence proceeds as shown in Fig. 2.
Firmicutes was the subdominant phylum, which contributed 47.52% to the total sequence reads in MC group.
The M is the total sequence number of the ordinal variable.
In many species, only a small fraction of the total sequence of the genome encodes protein.
The total sequence yield was 39.1 million reads.
In the case of the nucleoprotein antigen, the detected peptides represent 59% of the total sequence.
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