Sentence examples for total depleted from inspiring English sources

Graphs illustrate the locations of either the total, depleted or enriched HNF4A sites associated with the up and down-regulated genes within a window of ±40 kb with respect to the TSS.

PolyA+ RNA, total RNA and total RNA depleted of ribosomal RNA were studied.

As shown in Figure 1 and Additional File 2: Table S1, the highest fraction of non-exonic reads consistently occurred in total RNA (approximately 51%-64 51%-64total RNA depleted of ribosomal RNA (RiboMinus RNA, approximately 50%-62%).

Ratios were derived from pairs of total and depleted preparations generated from the same biological sample.

Ribosome-protected mRNA fragments (RPFs) and fragmented total RNA depleted for ribosomal RNA were sequenced for each sample.

For alpha-proteobacteria, only one pilot study applying pyrosequencing of cDNA derived from total RNA depleted for rRNA sequences of S. meliloti was reported [ 40].

Independent directional and nondirectional cDNA libraries were generated from polyadenylated RNA (polyA+) and total RNA depleted of ribosomal RNAs (ribo-) and analysed by high-throughput sequencing.

However, Pearson correlation between total and depleted samples was satisfactory (0.900), and the percentage of DEGs was not significant, showing that the expression patterns of the detected genes were not affected.

A total of 10 μg of total RNA was depleted of ribosomal RNA using the Ribominus Eukaryotic kit (Invitrogen).

The MD 257 template for amplicon generation was based on the total RNA fraction depleted of poly(A)+RNA (see "Preparation of genomic DNA, total RNA, poly(A)+RNA and cDNA").

The pellet containing RNA was resuspended in 20 μL of sterile H2O. 10 μg of total RNA was depleted of ribosomal RNA using GeneRead™ rRNA depletion kit (Qiagen) and RNA sequencing libraries were generated using the Ion Total RNA-seq kit v2 (Ion Torrent™, Life Technologies) according to manufacturer's instructions.