Mean residuals for individual observatories (Fig. 3, top) take larger absolute values than the mean over all observatories, reflecting the smaller amount of data and some level of spatial variability that is averaged out when considering a large number of observatories.
We ranked genes in a descendent order by their absolute fold change values and then selected the top ten percent genes (absolute values of fold change larger than 1.7) with adjusted P-value less than 0.01 as candidate differentially expressed genes (DEGs).
In the panels from top to bottom, absolute value of the pulse shape, complex phase, and spectrum of the optimized pulse (solid black lines) and of the guess pulse (dashed red/gray lines).
The top panel of Fig. 15 illustrates the sensitivities (absolute values) calculated from the initial guess (shown at the top panel of Fig. 14) from which "Equivalent Model 1" was produced.
Top 10 genes with regression coefficients of highest absolute values.
The top panel of Fig. 10 depicts the sensitivities (absolute values) computed from the initial guess (shown at row 3 of Table 3) from which "Equivalent Model 1" was evolved.
Figure 3, top left, gives the absolute value of estimated effects and Figure 3, top right, gives a scatter plot of phenotypes vs. predicted genomic values; this prediction does not include differences due to sex, litter size, or cage.
