Sentence examples for tools for repeat from inspiring English sources

Although tools for repeat and misassembly analysis of bacterial genomes have recently been developed [ 8], genome browsers generally contain little or no information regarding which parts of the assembly have an unusually large number of aligned sequences and therefore may contain collapsed repeats.

Use measuring tools for repeat projects.

In particular this might be of use in developing tools for comparing repeat structures.

The following are the most commonly used tools for extracting repeat regions of a genome: TRF [ 11], TROLL [ 12], Misa [ 13], Mreps [ 14], SciRoKo [ 15], Sputnik [ 16], SSR Locator [ 17], IMEX [ 18], and GMATo [ 19].

Several methods and tools for detecting repeats in large protein databases are available [ 13- 16].

Work carried out by Lim et al. [ 2], Mudunuri et al. [ 8], and Leclercq et al. [ 1] reviewed and tested the main tools for identifying repeats.

R EPEATM ASKER[ 20] has become the default computational tool for automated repeat annotation.

Some existing software tools for finding tandem repeats in a sequence include: TRF (Tandem Repeats Finder) (11), mreps (12), ATRHunter (13), STRING (14) and TandemSWAN (15).

Each of the tools for locating tandem repeats relies on certain assumptions and definitions.

In this paper, we used mreps [ 10] for our analysis, but the study can be extended to other TR search tools, for instance, Tandem repeats finder [ 11].

Although technically complex, MLM is recommended as a useful tool for analyzing repeated measures data from speech research.