Sentence examples for tools cluster from inspiring English sources

First, we measured the speed of tools Cluster 3.0 [ 4], MeV 4.0 [ 6], and EPCLUST 1.0 [ 8] in order to later compare HappieClust with the fastest tool.

Separately there is a triple of sequence assembly-based software (Phred, Phrap, PolyPhred), and a pair of clustering software and visualization tools (Cluster, Tree View).

Some tools cluster the FEA results, like DAVID-FAC (Huang et al., 2009) and GeneTerm Linker (Fontanillo et al., 2011), but their output is provided as large tables and there are not many tools to integrate and visualize these results.

Additionally, our expectation is that we can perform the continuous inclusion of new complexes (including new MHC alleles) and the development of automated tools (clustering cross-reactive targets).

In this paper, an analytical tool — cluster analysis — that is commonly used in biology, archaeology, linguistics and psychology is applied to materials and design.

Hierarchical clustering is a more frequently used method, but visualization via one-dimensional lists can lead to poor resolution of related genes even if a SOM gene ordering influences the branch flipping, as implemented in the software tool Cluster [ 2].

This tool clusters the compounds based on the structure similarity using the single linkage algorithm [44] and allows to download a similarity matrix containing the similarity for each drug drug pair.

This tool clusters various ICD-9 diagnoses into a manageable number of meaningful categories [ 12], indicated as 'CCS diagnostic groups'.

This tool clusters gene sets based on the ratio of the intersection and union of genes in the leading edge; a value of more than 0.25 was required for genesets to be considered to cluster together.

We have developed tools to cluster genes from microarray experiments using semantic similarity measures.

And computer scientists have developed tools for clustering and tracking articles and blog posts, typically by subject or political leaning.