Exact(1)
Spikes or vibration effect and eddy currents due to the commutation of strong diffusion gradient pulses, were corrected using the Quality Check pipeline of the Connectomist toolbox used in this study (Duclap et al., 2012).
Similar(59)
The version of the AMIGO toolbox used in this work is provided as Additional files 4 and 5.
The process of optimizing σ is a default built-in process in NeuroShell toolbox which was used in this study (Ward and Sherald 2006; Al-Dousari and Garrouch 2013).
Default morphological operations as defined in the Matlab Processing Toolbox 2011 (MathWorks) were used in this study.
For the NRC method, both stimulus spectrograms and spike trains were binned at 1 ms resolution (the temporal resolution required by STRFPak, the publicly available Matlab toolbox for STRF estimation we used in this study; see Section 2.5).
The computation and algorithms used in this study was made using MATLAB and Bioinformatics toolbox [ 37].
The parameter setting we used in this study can be found in Table 2, which are the default values in PSOt toolbox [ 31].
Animals used in this study were adults.
Two isolates were used in this study.
Passages 5 15 were used in this study.
Four proteins were used in this study.
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