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In this work we present a software toolbox to perform global analysis in the Matlab environment.
The software dedicated to the automatic processing of a FVI has been implemented in Matlab and uses the Optimization toolbox to perform the local optimization tasks described above.
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More particularly, the create_structure and the pw_integration functions within the CDF toolbox are used to perform these operations.
A MATLAB function, classify.m in Statistics toolbox is used to perform QDA classification.
Our numerical implementation in MATLAB (Release R2010a) uses the optimization toolbox routine fmincon to perform the minimization.
MATLAB's Statistics Toolbox was used to perform the two-way mixed design analysis of variance (ANOVA).
This is another tool in your toolbox to do it".
In this study, we used the COBRA toolbox [ 13, 14] to perform FVA.
The Bayes Net Toolbox was then used to perform a Baum-Welch algorithm to optimize the prior probabilities, the transmission matrix, and mixture of Gaussian parameters.
It provides relatively high spatial resolution (approximately 1 × 1 × 1 mm in most modalities) and a rich toolbox that enables researchers to perform anatomical, physiological, and metabolic measurements (see sidebar on "Magnetic Resonance Imaging Techniques" for detailed descriptions of the various techniques).
This toolbox provides a basic setup to perform purification of protein complexes and increase the number of annotated transcriptional regulators and genetic circuits in C. albicans.
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