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Visual Basic.NET, version 2003, was used to write the computation.
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JC and AJ performed all the computations, analyzed the data and contributed to writing the manuscript.
We argue that multi-stage languages are useful as programming languages in their own right, that they supply a sound basis for high-level program generation technology, and that they should support features that make it possible for programmers to write staged computations without significantly changing their normal programming style.
To write programs that can offload the computation onto the GPU and utilize its power, new technologies are needed.
To do so, a simple Matlab code was written to measure the computation time required of a central processing unit (CPU) to evaluate a point in the ROC domain.
A MATLAB script was written to automate the computation of protein contact maps (PCMs) for all seeded domains of the 1018 folds at various threshold interaction distance parameter values (Figure S4).
We write scripts to distribute the computation among multiple cores/CPUs and run multiple computing analyses simultaneously.
At the end of computation the results are written back to the VM class which subsequently write the final result to the MySQL database server.We implement virtual file service (VFS) functionalities in combination with allocation and control to provide an effective and flexible storage server.
A script has been written for the computation in R of the SGoFicance Trace.
In order to facilitate the computation, a program code is written that allows the computation to be completed within a couple of seconds on a personal laptop computer.
LL conceived the study, wrote the software, managed the computation of simulation results, developed the theoretical aspects of the paper, estimated many parameters, analyzed the results and wrote the manuscript.
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