Sentence examples for to find alignment from inspiring English sources

Our objective is to find alignment functions and such that frame is similar to frame, for, where is the total number of possible matching frame pairs.

It uses MUMmer (Kurtz et al. 2004) to find alignment positions and identify areas of synteny of the contigs against the reference.

One participant reflected on how she attempts to find and maintain balance: "Sometimes you feel like you are spinning a bunch of plates trying to find alignment of everything.

We wish to investigate two different questions: (i) compare the ability of the different methods to find alignment with many conserved interactions, and (ii) assess whether conserving more interactions really helps in retrieving more functional orthologs.

With enough time, one would be able to find alignments which are found with other codes, but missed or miscalculated using our methods.

Given such a scoring scheme, the second problem is an optimization problem, namely to find alignments or trees, respectively, with optimal (or near-optimal) scores.

The platypus contigs in the database contain several predicted genes, which were then identified by blasting to find alignments with the NCBI human genome database.

The Illumina assembly was then used to make a BLAST [ 97] database, to which the 454 contigs were searched using BLAST to find alignments with a minimum E-value 1e-20.

Currently, structure-based techniques, which use structural properties like shared relationships across sources to find alignments between concepts, are applied in combination with lexical techniques, as it has been demonstrated that it increases the overall performance [ 42- 44, 46, 47].

We set MI-GRAAL to use graphlet degree vector similarity (GDS) alone, as well as to use GDS coupled with sequence similarity (GDS+SEQ); since it is a randomized algorithm, we repeat each alignment process 15 times for GDS and 15 times for GDS+SEQ, to find alignments of the best topological and biological quality.

Second, we measure YAHA's ability to accurately find alignments when using the OQC algorithm for non-chimeric queries.