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Then, its alignment characteristics are discussed, along with the alignment process.
The BWBBLE program supports parallel execution for the alignment process.
It incorporates secondary structure information into the alignment process.
In summary, our method takes advantage of (i) second-order Gaussian derivatives detectors for localizing the markers [21], (ii) a cluster analysis to identify them throughout a series and (iii) iterative procedures to refine the alignment process.
YAHA breaks the alignment process into six stages.
Ten different genome indexes (Table 5) were built for use in the BFAST alignment process to be robust to errors and variants in the short (typically 36 base pairs) reads used throughout this project.
But the Compas alignment process went more smoothly, she said.
The overall alignment process is as follows.
Unknowns were retained during the peak alignment process.
Figure 20 Alignment process of two range profiles for the global range alignment algorithm.
The alignments were processed in the Sequence Alignment/Map (SAM) format with the program SAMtools [ 16].
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