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The significance threshold was inferred at p < 0.05.
The search parameters were: Enzyme, trypsin; Fixed modifications, carbamidomethyl (C); Variable modification, oxidation (M); Peptide mass tolerance, 40 100 ppm; Maximum missed cleavages, 2. The accepted MOWSE score threshold was inferred at P < 0.05.
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The network based on PCC-threshold was inferred by first calculating the PCC for every gene-gene pair in the dataset yielding 8,377 × 8,377 PCC values.
The statistical significance threshold for association was inferred by the simpleM method.
If a test statistic exceeded the threshold a QTL was inferred, however, at most one QTL was flagged from each chromosome.
If the calculated F-test statistic exceeded a specific threshold, a single-trait QTL was inferred to be present at the position showing the highest statistical value.
Finally, the topology of the network was inferred by thresholding the approximate posterior distributions of A i j, i.e. if the posterior probability of A i j = 1 is higher than a threshold value (p t h ), then we assumed that node j directly influences node i.
Statistical significance was inferred at a threshold of P < 0.05 after family-wise error (FWE) correction.
An upper threshold of 35°C for the maximum temperatures in the warmest month was inferred from this map, beyond which leopard cat locations were very sparse (Figure 9).
The domain architecture of all retrieved sequences was inferred by performing a Pfam scan with the gathering threshold as cut-off value.
The mechanism of sliding was inferred to be interface-diffusion-controlled diffusional creep with a threshold stress (Bingham flow).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com