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The dependence of selection threshold on the number of selected features for 5 gene expression databases.
This crossover point can be determined by setting a threshold on the number of nodes that is present in the decision tree.
In order to assure the QoS for the licensed users, the WSP determine a threshold on the number of channels allowed to licensed users and reserves the rest of bandwidth to unlicensed users.
ACE-it only tests genes that meet the criteria of contamination and balance, which are controlled through a threshold on the number of samples.
To find an optimal threshold on the number of clusters, we use the Silhouette method, which compares the tightness and separation of clusters [42].
3. tn, is threshold on the number of supportive reads.
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N, the total number of tests; tN, the estimated number of tests representing true null hypotheses; fN the estimated number of tests representing falsified null hypotheses (i.e., true marker-QTL linkage); PFP, the 0.20 PFP CWER P-value thresholds; oN, the observed number of marker tests that passed the significance threshold; Power, the estimated power of the test; ND, not done.
Arbitrary thresholds on the number of reads reporting a variant introduce biases due to the uneven distribution of depths along the genome.
A more detailed assessment of the effect of the use of response thresholds on the number of false positives and the effect on false negatives was done for a subset of 130 pesticides that were spiked to the samples.
Authors' response: Selectivity is defined in our manuscript as the strength of the effect of increasingly stringent E-value thresholds on the number of hits retrieved by the different search methods.
Finally, for the Global Set we applied varying thresholds on the number of studies, filtering out associations with less than 8, 10, 12, 14, 16, 18 or 20 studies, respectively.
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