Sentence examples for three diverse data from inspiring English sources

For an example with three diverse data types, we integrate the ChIP data of Harbison et al. with binary PPI data obtained from BioGRID (Stark et al., 2006) and a gene expression time course dataset of Granovskaia et al. (2010), with the initial intention of identifying protein complexes whose genes undergo transcriptional co-regulation during the cell cycle.

The functionalities of bioalerts are illustrated in a tutorial (Additional file 2) using three diverse bioactivity data sets, namely: (1) Ames mutagenicity data for 1752 compounds [27], (2) (hbox {pIC}_{50}) values for 2311 compounds on human cyclooxygenase (COX) 2 [16], and (3) blood brain barrier (BBB) data for 157 organic compounds [28].

Specifically, we compare 23 single models and bootstrap aggregating (i.e., bagging) models for their predictive abilities across five diverse medical data sets.

For purposes of hypothesis generation, seven diverse eQTL data sets (drawn from six independent high-throughput studies) were chosen from those deposited in the Chicago QTL genome browser [ 26] (http://hsb.upf.edu/), and reduced to their overlap with the set of Genotype-Tissue Expression (GTEx) [ 27] candidate QTLs.

As noted above, six raw yeast PPI data sets were investigated here encompassing three diverse HT technologies: TAP (three data sets), HMS-PCI (one data set), and Y2H (two data sets).

We evaluated the CCC v2 system in three important ways on diverse data sources.

Eight QSAR models were built using various types of descriptors (from ADRIANA.Code and Dragon software) with two publicly available structurally diverse data sets, including recent data deposited in PubChem.

The "Combined-AP/MS" and "LC-multiple" datasets were compiled from the affinity purifications followed by the mass spectrometry (AP/MS) method and literature curation, respectively, while the other three datasets were compiled from diverse data sources.

The latter, were created by collecting and integrating data from three diverse resources, each one with different content covering from rare monogenic disorders to common complex diseases.

Mbuna embryos possess proportionally larger subpallial, and non-mbuna exhibit the opposite, larger pallia (Student's t-test, n=16 for each of mbuna and non-mbuna, t=17.218, P<0.001, Fig. 1a; Table 1a shows data for three diverse species of mbuna and non-mbuna each, measured at stages 14 and 15).

> -wrap-foot> DBM transcriptome data from three diverse sources were separately aligned to the Fuzhou-S reference genome to determine the impact of genetic diversity on the mapping rate.