Sentence examples for threading a sequence from inspiring English sources

The decoy ligand were constructed by threading a sequence s decoy = IWMTIYMIIIT through the SLAM peptide conformation c ligand for the informational function, and s decoy = RLPTIYICITG for the physics-based function.

We modify the target structure by circularly permuting it and shifting (threading) a sequence along the chain with a step of five residues.

To thread a sequence s into a protein backbone conformation c, the side chain replacement algorithm SARA [ 35] was used.

In order to model a three-dimensional structure of mouse Wdr36, we thread a sequence of Wt Wdr36 through the database of known protein structures using the SMART 6 engine (13).

Technically, the threading of a sequence through a core is performed by a constraint program.

These methods are based on different approaches, which range from threading of a sequence into parallel or antiparallel fibrillar β-structures, to calculating the enthalpic and entropic costs associated with the conformational transition between folded and aggregated structures, to using energy functions, which take into account the physicochemical properties of a given amino acid sequence.

We define thread as a sequence of events where one event is generated by a previous event in the sequence.

Sometimes a guiding thread ties a sequence of posts together: "There's a series at the beginning of my video stream on Instagram that explores fashion in a somewhat crazy way, introducing procedural deformations, simulations, and natural elements growing from the models," Diacono tells The Creators Project.

A 3 amino acid sequence to sequence number misalignment in RCSB 1Y0F in the vicinity of position 876 of the α2 chain (part of the α2 sequence was moved 3 sequence positions towards the N-terminus) was corrected by threading the correct sequence into the correct sequence number positions at the d band site before the molecular modelling calculations described above were conducted.

A homology model for the C-terminus (amino acids 406 914) of TaSSIVb was built by threading its sequence onto the 3D structure of AgtGS.

The initial RPGR model was built based on the alignment and threading the sequence of RPGR onto the template crystal structure of RCC1 (PDB code: 1a12 subunit A (Renault et al., 1998)).