The branch lengths in the genealogy indicate clear differences in tubulin evolutionary dynamics not captured by tests of selection, such that we used Tajima's rate test to identify substitution rate difference among tubulin proteins.
Parts of the haplotype network for this group consist of a star-shaped mtDNA genealogy, indicating a recent population expansion.
Third, the large South American genotype II cluster, as part of the full genome MCC genealogy, indicates additional introductions of genotype II into Brazil.
Members of the same clonal complexes were consistently clustered together in the 19 locus genealogy, indicating the general robustness of the assignment of clonal complexes on the basis of seven loci.
The topology of Ex1 genealogy indicates that, while African chromosomes are relatively diverged from one another, most Asian and European haplotypes are clustered and all carry the Gly191 allele (Fig. 4A).
(iii) Visual inspection of individual gene genealogies indicates obvious incongruence among the phylogenies of several loci.
Comparison with simulated neutral genealogies indicates that the low average number of pairwise differences (πA = 0.0021; πB = 0.0002) is significantly unlikely under the neutral model in both clades (clade A p < 0.0005; clade B p < 0.05; Table 3).
Data from our gene genealogies indicates that gene conversions between homologous genes of the mat chromosomes have occurred multiple times during the evolutionary history of N. tetrasperma, despite the suppression of recombination.
This can indicate injury.
Different markers have their own unique genealogy, which may indicate concordance or divergence from the species' history.
