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The goal of this algorithm is to find sets of genes that would have very similar alignments if they were aligned independently.
If only two contigs matched a peptide, they were aligned and if they overlapped with an alignment score greater than 90, they were joined into a single contig.
They were aligned using Clustal W (1.82) multiple sequence alignment program (http://www.ebi.ac.uk/clustalw/).ac.uk/clustalw/
After adding blebbistatin, the neurites also formed fascicules, but they were aligned parallel to the direction of fiber alignment.
To inspect the quality of the NaS reads, they were aligned to the reference genome using BWA mem aligner [ 16].
They were aligned with Oncidium plastome using the whole VISTA genome alignment tool (Frazer et al. 2004).
They were aligned with MAFFT using the auto option [ 52], alignment columns were masked using ZORRO with a confidence score cutoff of 5 [ 53].
Then we used xv to rotate/crop the images so that they were aligned.
Ms. Patel said she knew they were aligned, "but I wasn't expecting a hundred percent".
They were aligned lengthwise in the north-south axis during experiments.
Policy texts often present such discourses together, as if they were aligned.
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CEO of Professional Science Editing for Scientists @ prosciediting.com