Sentence examples for their alignment to from inspiring English sources

The POTRA domains for conserved BamA proteins with five POTRA domains were predicted based on their alignment to the sequence A1KRL4_NEIMF, which was aligned with, and the POTRA domains defined based on, the BamA Neisseria gonorrhoeae structure (Noinaj et al. 2013); the alignment with structural information was obtained through phyre2.

As the compass has moved elsewhere around the earth, the atoms change their alignment to reflect the changing magnetic field, changing the amount and angle of the light as it passes through.

The aim is to bridge the business-IT gap and to support modelling activities in the Future Internet Enterprise supply chains on multiple abstraction and detail levels, and also to facilitate their alignment to domain-specific frameworks such as SCOR or VRM.

Contigs were ordered and oriented based on their alignment to the reference genome C. difficile 630 using NUCMER.

Reads were filtered for quality prior to their alignment to the Sorghum bicolor genome.

The reads from these SAM files were then separated based on their alignment to the forward or reverse strand.

Aligning the reads to the contigs simplifies their alignments to the reference by guiding them with the much longer contigs as backbone (see below).

First, students are encouraged to visually inspect their alignments to appreciate that some regions are more conserved among sampled sequences while others appear more chaotic and variable.

FastBLAST uses the known families and their alignments to avoid doing unnecessary work, and it uses fast clustering to further reduce the amount of work.

Overlapping contig sequences were used to form longer sequences according to their alignments to known precursor sequences in the miRBase.

We then manually removed all PSGs with potential errors in their alignments to minimize the false discovery rate.