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The number of proteins with the combination of the specified modules is noted in the genomes of A. cellulolyticus (left) vs. C. thermocellum (right).
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For example,stxx (when 1 2) ** !. Uses show-requires to analyze the requires of the specified module, defaulting to the currently entered module if we're in one.
Sequence preparation was as described above, but PhyloGibbs-MP was run treating all of the sequence as potentially regulatory (the specified "module dimension" being the entire length of the sequence).
KHFB: Known HF biomarkers controlled by the TF within the specified module.
†Fisher's Exact test was used to calculate a p-value reflecting the probability that the specified module and pathway/process would have listed number of overlapped genes.
If a module tries to play a role not specified, module monitoring exits the module by force or makes it turn to ready status and restart the module.
Methods based on coevolutionary criteria require more elaborate data, but they have the advantage of being able to specify modules without prior assumptions about why they exist.
To ensure that the contour errors are bounded within the specified value, the dynamics module further modifies the feedrate profile based on the derived contour error equation.
The database will return a list of validated motif modules that are related to the selected motifs and a visualization of all TFBSs of the motifs in these validated motif modules in the specified genomic regions.
When the degradation curve crosses through the specified threshold of alarm, prognostics module is triggered and time-series prediction is performed using multi-nonlinear regression models.
For gradient corrected calculations, the NWPW module automatically generates pseudopotentials using the specified exchange correlation functional.
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