Sentence examples for the set of alignments from inspiring English sources

This converged PSSM and the set of alignments correspond to a local optimal solution.

The most valuable feature here is the set of alignments, AMLRs, sequence logos and HMMs.

We split the set of alignments in 6 bins of equal size, stratifying them by the mean % identity values observed with two close target species.

For this purpose we have devised an algorithm called OQC, which finds the set of alignments that cover the length of the query with the maximum coverage score.

The set of alignments that we used to test the algorithms comprise a wide range of lengths, number of taxa, and types of molecular markers, confirming the utility of our new algorithm for a wide range of phylogenetic analyses.

With these values precomputed during each iteration of the E and M steps, these steps run in and time, respectively, where A is the set of alignments of all reads.

These were calculated for all competitive assemblies using the set of scaffold lengths and the set of alignment lengths of the scaffolds to the VFRs.

The set of alignment parameters has shown a significant impact on the population of sequencing reads identified as endogenous by BWA.

Let D1,..., D m be the set of alignment columns in this reduced Pfam database, let S i be the number of species in alignment column i, let D i (j) be the amino acid from species j in column i, and let E i (j) be the codon encoding that amino acid in the mRNA of species j.

This motivates the search for an agreement with the set of pairwise alignments in order to obtain higher accuracy of alignment in MSA.

Unfortunately, integration over the set of all alignments is not practical, even if we constrain the alignment of leaf sequences to be constant.