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For the replicate sample one-sided P-values are displayed (Table 4).
Of the 100 replicates in our batch processing analysis used to account for phylogenetic uncertainty, the significant diversification rate shift at the ancestor of K. antennatus, was consistently identified along the same branch although slight tree-topology changes occur among the replicate sample.
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A cluster analysis of the different microarray experiments also showed the consistent and specific upregulation of diverse MHC II genes upon CNOT2 knock-down compared to the various control samples, as well as the reproducibility between the replicate samples (Fig. 4B).
The proportion of discordant genotypes in the replicate samples was 0.417%, across all 400 markers.
The width of each ellipse reflects the amount of variation (analogous to the standard deviation) within each sample group, the replicate samples.
For four of the replicate samples, mean concordance of called genotypes in both samples (saliva and blood) was 99.98% (Table 1).
As a control, five DNA samples were analyzed twice, i.e., the NF-κB fragment was independently amplified and sequenced twice from the same DNA sample; in all five cases, the replicate samples yielded identical sequences.
This tendency was confirmed in the replicate samples.
Similarly, we identified 1776 and 1714 transcripts in the replicate samples for the GFP+ cell population.
The software also calculates the coefficient of variation between the replicate samples.
The consensus rate in the replicate samples (n = 61) was 100%.
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CEO of Professional Science Editing for Scientists @ prosciediting.com