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We computed the proportion of classifications in the MR that received concordant classifications by TMA and computed Kappa statistics for each of the four ER/PR subtypes (similar to the analysis in the GEM dataset).
The relationship between the SI index and the proportion of classifications of the Eff stimulus across the population of cells (Fig. 3A) shows a robust correlation between the SI of individual neurons and the classification of the AS image (r = 0.45, P = 0.0001, n = 67).
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The percentages of classification errors obtained by normalization methods could be used to obtain a 95% confidence interval of the mean of the proportion of classification errors for the normalization.
Classification and permutation testing were performed separately for the left and right hemisphere and separately for Experiment 1 and Experiment 2. In order to investigate the consistency of correct classifications for each voxel, we calculated the proportion of correct classifications for each voxel across subjects.
Accuracy was used as measurement for the proportion of true classifications by DeconSeq and calculated for thresholds of 95% query coverage and varying alignment identity.
Decoding performance for each cross-validation was estimated as the proportion of correct classifications, and the final decoding accuracy was calculated by averaging performances from all twelve cross-validations.
Sensitivity (se) was defined as the probability of a true positive, se = tp/ tp+fn); specificity (sp) as of a true negative, sp = tn/(tn+fp); and accuracy (ac) as the proportion of correct classifications, ac = (tp+tn)/ tp+fp+tn+fn).
expected, the proportion of correct classifications increases from 50% (when there is no true effect) as the effect of the parameter and/or the sample size increases.
There was a significant difference in the proportion of correct classifications in the Watchtowers (p=0.01), but none of the other variables showed any significant differences (0.10<p<0.70).
Next, the dendrogram was applied to the remaining one subsample for the test and the proportion of correct classifications was calculated.
There were significant differences in the proportion of correct classifications among the casualty clinics, but neither employment percentage nor profession or work experience affected the triage decision.
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