We employed the same parameters as described for the phasing procedure in build 37, and included autosomal and chromosome X markers.
Here, the phasing procedure may incorrectly infer that an allele transmitted by the recipient was instead transmitted by his/her partner; thus the potential NCO allele is not necessarily observed in the grandchildren.
For the phasing procedures BEAGLE was faster, than SHAPEIT2 which required around 52 hours to phase BTA29 for the 242 available animals, whereas BEAGLE performed the same job in less than 3 hours.
Data manager could not progress to the next phase of data entering, until all the previous phase procedures (stage 1,2,3) had been concluded.
In addition, the phase reconstruction procedure includes a low-pass window function which further deteriorates the reachable phase resolution for a certain spatial resolution [49].
MU participated in the automation of the solid-phase procedure.
Moreover, transfer students were unable to participate owing to the two-phase procedure, because the school and fiscal years in Japan begin in April.
However, the phase reconstruction procedure is more complex compared to off-axis holography.
Preliminary results of the phase locking procedure are promising and we can achieve a constant intensity and color output.
5) Application of the phase extension procedure in this study is used to extend the phases to the highest resolution available from the X-ray data.
