For example, read R1 (ACGTCC) is split into two seeds (ACG and TCC), if the number of permitted errors is 1.
The regularization parameter C controls the generalization capabilities of the classifier and it must be selected by the user, and ξ i are positive slack variables enabling to deal with permitted errors.
The balance between network complexity and an adequate model error is controlled by the parameter "allowedError", which is the permitted maximum error for each time series.
Blunt adapters were ligated to each amplicon to facilitate circle replication [SMRTbell™ template sequencing] and to permit error control by calculating the consensus ('circular consensus sequence' or CCS).
For each locus, we performed 100 bootstrap replicates, which permits error estimates to be generated on the species trees; this entire process was streamlined using a Perl-scripted pipeline developed by FTB and A. Narechania [ 51].
Considering the possibility of genetic mapping errors resulting from missing data and double crossing-overs, a valid inversion event was recognized if the order of the marker cluster was reversed over a genetic distance that was greater than the permitted distance for error (i.e., 0.6 cM in the SY-PM genetic map).
The Court has permitted harmless error analysis regarding deprivations of the right to counsel at pre-trial stages of criminal proceedings, e.g., Coleman v. Alabama, 399 U.S. 1, 90 S.Ct.
In addition to the identification of the switch, the panel allowed for expeditious resolution of the error, permitting the continued use of the data in downstream analyses.
The relative errors are all within the range of the errors permitted.
As for sequence matching, if a more sensitive search is required that permits errors, it is still possible to use the exact match algorithms to find seed matches, and then join or extend these by direct testing.
