Sentence examples for the median coverage from inspiring English sources

For 'TAPS (down-sampled)', random reads out of all mapped TAPS reads were selected so that the median coverage matched the median coverage of WGBS.

The median coverage for varicella was 93.3%, including nine states that had rates of at least 95% and eight below 90%, along with the District of Columbia.

Since the median coverage of an NRSE is 21 bp while the stripe CRMs are known to be densely populated with binding sites, we set m = 5 for the stripe WPHs and m = 3 for the NRSF WPHs.

The median coverage probability of the Wald intervals does not change much for σ1 = 0.5, while the median coverage of the LT interval decreases to 89%.

The median coverage was 10, average was 15 and maximum coverage was 190.

The median coverage was 142X on chromosome 1 and 140X on chromosome 2.

The error rates depend on the thresholds placed on called variants that have to be set taking into account the median coverages achieved in the family study and the robustness of the following analyses to genotyping errors.

When the same procedure is applied to the triploid tumor sample (Fig. 4C and D) the base coverage is calculated to be 9.84 and the expected median coverage is 28, giving a correct ploidy estimate of three for the sample.

To determine whether the calculated median coverage is a valid proxy of the coverage associated with single copy genes, sequencing reads were remapped on a set of 10 single copy genes previously identified in the PST-130 assemblies [ 14].

The average median coverage for them was 123.3×, with 90% of the individuals presenting a coverage >20× in at least 99.9% of the genome (supplementary material S2, Supplementary Material online).

The average median coverage of annotated exons with aligned reads was 5.43X.