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However, the reference genome may contain bases that do not represent the majority of the read data.
Specifically, the loss of heterozygosity over a large region, a collection of read pairs whose mates consistently map much further apart than the majority of the read pairs, and soft trimmed reads all pinpoint the deletion site unequivocally.
Almost all remaining unmapped reads corresponded to the untrimmed EST set (data not shown); those that did not had low complexity regions over the majority of the read length, and thus were not assembled.
Their paper used the let-7 family as an example since they account for the majority of the read counts observed.
The majority of the read lengths fell between 350 bp and 500 bp.
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Based on our methodology, we mostly expected the majority of the reads to be of RNA viral origin.
The majority of the reads (82.62%) were in the range of 20 to 24 nt in length, with 24 nts (51.15%) being the most represented class of non-redundant species followed by 23 (10.40%), 22 (9.81%) and 21 nt (9.08%).
For instance, the majority of the reads at the SPAC10F6.15 locus were mapped to the Crick strand whereas the annotated transcript is on the Watson strand (Supplementary information file, Figure S6), indicating that antisense expression might be dominant for at least a subset of genomic regions.
The majority of the reads were in the range 200 400 bp (Fig. 1).
A representative genomic region with four genes showed that the majority of the reads overlapped with the annotated PA sites.
The majority of the reads were over 400 bp and the average length of the reads was ~356 bp.
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