Sentence examples for the list of alignment from inspiring English sources

These results are hyperlinked to external databases, and include the list of alignment descriptions and details about the pairwise alignments of each transcript with the corresponding BLAST hits.

BLAST results, both for nucleotide and protein database searches, are shown in a dedicated section in the classic BLAST output format, hyperlinked to external databases, and including the list of alignment descriptions and details about the pairwise alignments of the transcript with BLAST hits.

The reduce function scans the list of alignments for each read and records the best alignment if an unambiguous best alignment exists.

Both for nucleotide and protein database, results of similarity searches are shown in a dedicated section in the classic BLAST output format, including the list of alignments descriptions and details about the pairwise alignments with hits, each hyperlinked to external databases entries.

The list of significant alignments is then consolidated and reorganized into a labeled and tab-delimited matrix of best matches.

In addition, the ChromA (Hoffmann and Stoye, 2009) software is added to the list of supported chromatogram alignment tools.

The list of all the alignments is available in Additional file 5, Data S2, and on the Natto genome browser.

In this fashion, repeatedly calling the routine WITH_DISTINCT_ENDS ensures that the final list of alignments does not contain an alignment that shares an endpoint with a higher-scoring alignment.

The list of all of the alignment boundaries is generated allowing a quantitative determination of the transcriptional status of any genomic segment at the base pair level.

The list of homologs and the alignment of the mature sequence with the homologous precursors is shown in the Supplementary Materials.

Paths for an environment definition file and a file containing the list of environment feature annotated alignments are given to Ulla as input: $ ulla -c feature.def -l alignments.lst Ulla produces three different types of substitution tables: raw counts tables, substitution probability tables and log-odds ratio tables.