Sentence examples for the length of the alignment from inspiring English sources

In this formula, the identity t i of the true contigs i is calculated as the number of aligned bases over the length of the alignment.

Sequence identity was multiplied by the length of the alignment relative to the total protein length (≤1), which penalizes non-aligned regions.

Specifically, the standard Pearson correlation coefficient was calculated for each aligned pair of column vectors and summed over the length of the alignment to provide a raw score.

Static ground water table was not encountered in any of the trial pits dug for the collection of soil samples throughout the length of the alignment.

The scores were normalized by the length of the alignment.

Sequences were clustered if the identity was ≥95% (++ or +− strand) and the length of the alignment was ≥40 bp and ≥80% length of the shorter sequence.

The distance values show the number of substitutions as a proportion of the length of the alignments.

The larger number of SNPs detected resulted from the increase of both the depth of the contigs and the length of the alignments.

After trimming and gap removal, the alignment coverage was ≥80%, and the length of the alignments ranged from 138 to 13,160 bp.

Calculation of these scores would reflect the differences in two alignments of a pair of segments in terms of the substitution of PB at an alignment position as well as the lengths of the alignment.

To reduce the length of the pairwise alignment to that of the template alignment, gaps must be removed from the pairwise alignment.