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For example, in determining the SSI feature (substrate same as interactant), the interaction information alone is not sufficient.
The interaction information can be interpreted as multivariate dependencies among the attributes.
Meanwhile, the interaction information between target and ligand was presented in detail.
The interaction information presented in Additional file 11: Table S7 was then uploaded to Cytoscape (Shannon et al. 2003).
It suggests a connectionist clustering technique and activation spreading-based IR model using the interaction information retrieval (I2R) method.
This indicates that the two residues play significant roles in the specific recognition of FUNDC1 Ser13, which is consistent with the interaction information suggested by HADDOCK models.
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After calculating the phase, the phase interaction information needs to be extracted.
The protein interaction information of the above six model organisms was obtained from the PINA database.
By using the chromatin interaction information, we mapped the target genes of the TFBSs in cluster 2 that were only selectively activated in NPCs.
This indicates that the method performs well if we remove links from drugs which are having at least two or more known interactions, since it uses the given interaction information in the network.
The exact type of the relationship was not provided but was annotated manually for each sentence from the provided interaction information during the evaluation process.
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