Sentence examples for the entire set of arrays from inspiring English sources

Affymetrix 133A data was obtained for the 443 lung AD described by Shedden et al [3] with the entire set of arrays quantile normalized for that study.

Array data were lowess normalised (in Acuity) and the entire set of six arrays analysed as a group.

As an aside, we normalized the entire set of 80 arrays from all centers together.

Vari is the variance of the log intensity for gene i across the entire set of n arrays, and Varmed is the median of these gene-specific variances.

We define as "tentatively orthologous" a sequence from another species if it was the top scoring match in both parts of a reciprocal BLAST analysis pitting the entire set of maize array sequences with all known genes of that species as defined by TAIR (Arabidopsis) or TIGR (rice).

Unsupervised two-way hierarchical cluster analysis of both the entire set of the filtered array probes (35433 probes) and a subset of probes (371 probes) that showed the most overall variability (overall standard deviation >1.0) did not segregate the samples according to ascites volume (data not shown).

The plot presents the entire set of observables on an array in their original values.

Such an optimization process is very similar to those implemented in 'convex-hull' heuristics (which calculate the minimum polygon containing the entire set of points in an array [ 4]).

Cy3 and Cy5 global intensities were normalised with the entire set of spots on the array, Cy3/Cy5 ratios were calculated, each BAC clone was spotted in four replicates, the median values of replicate spots were calculated and these values were used to define the selection threshold for individual spots.

For the normalization of the entire set of 85 Affymetrix gene expression arrays, the Extrapolation Strategy (RMA+) algorithm (Harbron et al. 2007) was used that applies background correction, log2 transformation, quantile normalization and a linear model fit to the normalized data in order to obtain a value for each PS on each array.

Here, each of the eight gene sets was considered a target set and the entire set of 10,113 genes present on both arrays used in the MmBMM and MmRAW datasets served as the background set (see Methods).