Exact(57)
We thus used sequence data for only samples A1 and B in the downstream analyses to minimize the effect of the cross contaminations.
When researchers choose a less accurate tool, the decision may translate into billions of dollars lost owing to low productivity and any influence the downstream analyses.
The downstream analyses were implemented with R (version 3.1.3; R Foundation for Statistical Computing, Vienna, Austria, www.r-project.org) and Bioconductor packages32 version 3.1 (www.bioconductor.org).
If the assay is repeated, even with exactly the same experimental setup, the errors in the normalization factors will vary randomly, causing random spurious results in the downstream analyses.
All the downstream analyses were based on the clean data with high quality.
The log2-transformed expression data were used in the downstream analyses.
Both of the procedures performed [16], [32] turned out comparable in all the downstream analyses.
This is because the editing procedure removed many genes encoding ribosomal proteins from the downstream analyses because of their low standard deviation.
Similar(3)
The successful application of a soil metagenomic approach depends on selecting the appropriate DNA extraction, purification, and if necessary, cloning methods for the intended downstream analyses.
We note that restricting the number of allowed mismatches to one had no apparent effect on the remaining downstream analyses.
Again, this finding is probably more associated with the fact that ILC tumours exhibit a higher stromal content, thus skewing the subsequent downstream analyses.
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