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To collect the data, we retrieved the original newspaper articles.
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On the basis of these data, we retrieved the methylation status for all covered CpG dinucleotides.
The missing data we retrieved from the registry were mostly data on the trial's phases and sponsorship.
Although recent studies have suggested that contact patterns are age-dependent (44), the attack rates in the age-stratified data we retrieved did not vary with age (Web Figures 2 and 3 (http://aje.oxfordjournals.org/)).org/
For microarray data, we retrieved the expression intensities of each probe set from NCBI's GEO database.
The data we intend to retrieve involves three different NCBI databases.
"I'm not sure we're going to be able to retrieve the data we need," Morrison said.
By fitting the last expression to the experimental data we can retrieve the flux rate α and the concentration C s. Examples of fitting procedure are shown in Fig. 6.
To identify motifs enriched under ZNF274 binding sites from the K562 ChIP-seq data, we first retrieved 100 nt from each of the 337 binding sites (50 nt on either side of the mid-point of the peak).
To analyze this with a more comprehensive data set, we retrieved the coordinates and gene content of the 123 microsynteny blocks delineated based on comparative information of nine Drosophila species and known to harbor HCNE peaks (von Grotthuss et al. 2010).
Specifically, Heinzen's data was not included in the HuGE database at the time we retrieved the data, thus, the two gene sets are independent.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com