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The current version contains 1173 archeal CAS genes and 4396 bacterial CAS genes.
The current version contains 12,787 protein entries linked to 86,831 peptide entries identified using different MS platforms.
The current version contains data of 43 790 CAZymes of 159 protein families from 35 plants (including angiosperms, gymnosperms, lycophyte and bryophyte mosses) and chlorophyte algae with fully sequenced genomes.
The current version contains 3, 833 proteins involved in 11, 942 interactions derived from combined, non-overlapping data which are mostly obtained from the high-throughput application of the two-hybrid method.
(2) cobra.flux_analysis: a package for performing common FBA operations, including gene deletion and flux variability analysis [ 18]. (3) cobra.topology: a package for performing structural analysis – the current version contains the reporter metabolites algorithm of Patil & Nielsen [ 22]. (4) cobra.test: a suite of unit tests and test data.
Together with the expanded results showing comparable reduction of sensitivity to RALF1-regulated gene expression (response above) and lack of additive effects of combining fer4 and llg1 (response below), we believe that the current version contains data that considerably strengthen the FER-LLG1 co-receptor concept.
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Potential protein-protein or protein-DNA interactions were identified using Pathway Studio (Ariadne Genomics) that contains MedScan, an automated text-mining tool to search the entire PubMed and other public sources (The current version database contains more than 15 million Medline abstracts/full text).
In the current version, atBioNet contains only human protein-protein interactions.
The current app version contains code for eight separate data monetization firms in the latest version of the app.
The current version of ZifBASE contains 139 entries of which 89 are engineered ZFPs, containing 3-7F totaling to 296 fingers.
The current version of Hmrbase contains comprehensive information about ~2000 hormones, e.g., about their function, source organism, receptors, mature sequences, structures etc. Hmrbase also contains information about ~3000 hormone receptors, in terms of amino acid sequences, subcellular localizations, ligands, and post-translational modifications etc.
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Justyna Jupowicz-Kozak
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