Even in carefully executed experiments, the unmapped reads can comprise a considerable fraction of the complete set of reads produced, and can arise due to technical sequencing produced by low-quality and error-prone copies of the nascent RNA sequence being sampled.
The glycome, the complete set of glycans produced by a cell, is a dynamic indicator of the cell's physiology.
Until recently the "-omics" era consisted of studies in genomics (the study of genes and their functions), transcriptomics (the study of the complete set of RNA transcripts produced by the genome at one time), and proteomics (the study of the complete set of proteins produced by a species).
Advances in biotechnology have made possible the elucidation of the transcriptome, defined as the complete set of RNA transcripts produced by the genome at any one time.
We downloaded the complete set of variant calls produced by the 1000GP Consortium from ftp://ftp-trace.ncbi.nih.gov/1000genomes/ftp/release/20110521 and we estimated the allele frequency of all the SNVs and small InDels across the 1092 individuals (see Methods for more details).
Glycomics is a subset of the field of glycobiology that aims to identify the structure and function of the complete set of glycans (the glycome) produced in a given cell or organism and identify all the genes that encode glycoproteins.
We then produced the complete set of DNA sequences, which differ from the original by one nucleotide, by mutating all individual positions but keeping the rest of the sequence intact.
This work also produced the complete set of transcripts present in the wild type wasp testis, including those generated from a large number of new transcribed regions as well as from genes represented in the annotated reference genome (Akbari et al. 2013).
A parsimony analysis of the combined morphological and the complete molecular data sets (hereafter referred to as the "combined complete data set") produced a well-resolved and strongly supported single optimal cladogram (L = 6358, CI = 56, RI = 86; Figure 10).
Thus, for big permutations (n≥15), the time necessary to produce the complete set of traces makes impracticable any analysis.
The researchers pooled information from each person's transcriptome, a collection of molecules that reveal patterns of DNA expression; proteome, the complete set of proteins an individual actively produces; microbiome; and genome.
